Package: HyperG 1.0.0
HyperG: Hypergraphs in R
Implements various tools for storing and analyzing hypergraphs. Handles basic undirected, unweighted hypergraphs, and various ways of creating hypergraphs from a number of representations, and converting between graphs and hypergraphs.
Authors:
HyperG_1.0.0.tar.gz
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HyperG.pdf |HyperG.html✨
HyperG/json (API)
| # Install 'HyperG' in R: |
| install.packages('HyperG', repos = c('https://dmarchette.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 4 years agofrom:48fea6d712. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Aug 25 2024 |
| R-4.5-win | OK | Aug 25 2024 |
| R-4.5-linux | OK | Aug 25 2024 |
| R-4.4-win | OK | Aug 25 2024 |
| R-4.4-mac | OK | Aug 25 2024 |
| R-4.3-win | OK | Aug 25 2024 |
| R-4.3-mac | OK | Aug 25 2024 |
Exports:add.hyperedgesas.binary.hypergraphas.bipartiteas.graphas.hypergraphaseclique_hypergraphcluster_spectraldelete.hyperedgesdual_hypergraphedge_ordersepsilon_hypergraphequivalent.hypergraphsgraph2hypergraphH2hadjacencyhas.empty.hyperedgeshas.hellyhas.isolateshas.loopshcorankhdegreehnameshorderhrankhsizehyper_edgeshypergraph_as_adjacency_matrixhypergraph_as_edgelisthypergraph_as_incidence_matrixhypergraph_from_edgelisthypergraph_from_fuzzy_clusteringhypergraph_from_incidence_matrixhypergraph_from_literalhypergraph_from_membershiphypergraph_from_spectral_clusteringhypergraph_laplacian_matrixhypergraph.add.edgeshypergraph.add.verticeshypergraph.complementhypergraph.delete.edgeshypergraph.delete.verticeshypergraph.disjoint.unionhypergraph.entropyhypergraph.intersectionhypergraph.is.connectedhypergraph.spectrumhypergraph.unionhypergraph2graphincidence_matrixinduced_hypergraphintersection_setis.bi.conformalis.conformalis.empty.hypergraphis.forestis.hellyis.hypergraphis.hypertreeis.linearis.simpleis.staris.treekCoresknn_hypergraphline.graphlsemake_empty_hypergraphpendantplot_geom_hypergraphplot.hypergraphplotDegreeDistributionprint.hypergraphreduce.hypergraphremove.empty.hyperedgesremove.isolatesremove.loopsremove.redundant.verticesreorder_verticessample_geom_hypergraphsample_gnp_hypergraphsample_k_regular_hypergraphsample_k_uniform_hypergraphsample_sbm_hypergraphsimplify.hypergraphsubtree.hypergraphsummary.hypergraph
Dependencies:clicpp11gluegtoolsigraphlatticelifecyclemagrittrMatrixmclustpkgconfigproxyRcppRcppEigenrlangRSpectravctrs
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Hypergraphs in R | HyperG-package HyperG |
| Hypergraph as a bipartite graph. | as.bipartite |
| Convert between hypergraphs and graphs. | as.graph as.hypergraph graph2hypergraph hypergraph2graph |
| Adjacency spectral embedding. | ase hypergraph.spectrum lse |
| Clique Hypergraph | clique_hypergraph |
| Spectral Graph Clustering | cluster_spectral |
| Dual hypergraph. | dual_hypergraph |
| Epsilon-Ball Hypergraph | epsilon_hypergraph |
| Equivalent Hypergraphs | as.binary.hypergraph equivalent.hypergraphs |
| Two sections of a hypergraph. | H2 |
| Helly Property | has.helly is.helly |
| Test for loops, isolates and empty hyper-edges. | has.empty.hyperedges has.isolates has.loops |
| Degrees of a hypergraph. | hdegree plotDegreeDistribution |
| The number of vertices, edges and statistics of the hypergraph. | edge_orders hnames horder hsize |
| Rank of a hypergraph. | hcorank hrank |
| Adjacency Matrix of a Hypergraph. | hadjacency hypergraph_as_adjacency_matrix |
| Hypergraph construction. | hypergraph_from_edgelist hypergraph_from_fuzzy_clustering hypergraph_from_incidence_matrix hypergraph_from_membership hypergraph_from_spectral_clustering |
| Hypergraph from literal. | hypergraph_from_literal |
| Laplacian Matrix | hypergraph_laplacian_matrix |
| Add edges or vertices to a hypergraph. | add.hyperedges hypergraph.add.edges hypergraph.add.vertices |
| Convert between hypergraphs and graphs. | hypergraph_as_edgelist hyper_edges |
| The complement of a hypergraph. | hypergraph.complement |
| Delete edges or vertices of a hypergraph. | delete.hyperedges hypergraph.delete.edges hypergraph.delete.vertices |
| Hypergraph Entropy | hypergraph.entropy |
| Is the hypergraph connected? | hypergraph.is.connected |
| Unions and intersections of hypergraphs. | hypergraph.disjoint.union hypergraph.intersection hypergraph.union |
| Graph Incidence Matrix. | hypergraph_as_incidence_matrix incidence_matrix |
| Induced hypergraph. | induced_hypergraph |
| Conformal Hypergraphs | is.bi.conformal is.conformal |
| Is the hypergraph empty. | is.empty.hypergraph |
| Is an object a hypergraph? | is.hypergraph |
| Test for hypertree. | is.hypertree |
| Is a hypergraph simple/linear? | is.linear is.simple |
| Is a hypergraph a star? | intersection_set is.star |
| Test if a graph is a tree or a forest. | is.forest is.tree |
| K-Cores | kCores |
| K-Nearest Neighbor Hypergraph. | knn_hypergraph |
| Line Graph | line.graph |
| Empty hypergraph. | make_empty_hypergraph |
| Pendant Vertices | pendant |
| Plot a hypergraph. | plot.hypergraph |
| Print a hypergraph to the console. | print.hypergraph |
| Remove redundant hyperedges and isolated vertices. | reduce.hypergraph remove.empty.hyperedges remove.isolates remove.loops simplify.hypergraph |
| Remove redundant vertices. | remove.redundant.vertices |
| Reorder the vertices of a hypergraph. | reorder_vertices |
| Construct a hypergraph from a random collection of points. | plot_geom_hypergraph sample_geom_hypergraph |
| Erdos-Renyi hypergraphs. | sample_gnp_hypergraph |
| Random k-uniform and k-regular hypergraphs. | sample_k_regular_hypergraph sample_k_uniform_hypergraph |
| Sample from a stochastic block model. | sample_sbm_hypergraph |
| Subtree Hypergraph. | subtree.hypergraph |
| Print a summary of the hypergraph to the console. | summary.hypergraph |
